GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Stéphanie Robin

Simon Bray

Björn Grüning

Cristóbal Gallardo

Natalie Kucher

Teresa Müller

Delphine Lariviere

Jasper Ouwerkerk

Helena Rasche

Robert Meller

Yo Yehudi

Anton Nekrutenko

Bérénice Batut

Daniela Butano

Laura Leroi

Ava Hoffman

Jonathan Kreplak

Miaomiao Zhou

Elizabeth Humphries

Alexandre Cormier

Nathan Dunn

Deepti Varshney

Candace Savonen

Katherine Cox

Paul Zierep

Bazante Sanders

Simon Gladman

Mateo Boudet

Saskia Hiltemann

Anna Syme

Erwan Corre

Anthony Bretaudeau

Torsten Seemann

Frederick Tan

Funding

These individuals or organisations provided funding support for the development of this resource

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Avans

NHGRI GDS Community Network

ELIXIR Europe

IFB

ABRomics

NHGRI ANVIL

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.