Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

comment   Community Matrix Chat

Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Niall Beard

Alexandre Cormier

Anton Nekrutenko

Simon Gladman

Jasper Ouwerkerk

Valentin Loux

Nathan Dunn

Guillaume Gautreau

Miaomiao Zhou

Teresa Müller

Delphine Lariviere

Anthony Bretaudeau

Stéphanie Robin

Maria Doyle

Cristóbal Gallardo

Helena Rasche

Mateo Boudet

Erwan Corre

Paul Zierep

Björn Grüning

Simon Bray

Anna Syme

Torsten Seemann

Ekaterina Polkh

Kenji Fujihara

Romane LIBOUBAN

Felicitas Kindel

Deepti Varshney

Esteban Perez-Wohlfeil

Twishi Gulati

Bazante Sanders

Jonathan Kreplak

William Durand

Saskia Hiltemann

Gildas Le Corguillé

Hélène Chiapello

Anika Erxleben

Bérénice Batut

Laura Leroi

Nicola Soranzo

Funding

These individuals or organisations provided funding support for the development of this resource

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

Avans

IFB

ABRomics

ELIXIR Europe