Contributing to the Galaxy Training Material

Galaxy is a great solution to train the bioinformatics concepts: numerous bioinformatics tools are available (more than 7,000 in the ToolShed), it can be used by people without any computer science skills, it trains to use technology, outlining available resources and efforts that have made them accessible to researchers, it is scalable.
In 2016, the Galaxy Training Network decided to set up a new infrastructure for delivering easily Galaxy related training material. The idea was to develop something open and online based on a community effort, as always in Galaxy.

Material

Before you start: Designing your lessons

These tutorials will guide you on the pedagogy to create impactful training material

Getting Started with the GTN

These tutorials will get you started with the basics needed to contribute to the GTN. First we will show you how you can build the GTN website on GitPod or locally, and then the basics of creating tutorials and slides.

Advanced GTN Materials writing

Tutorials showing you how to use some advanced GTN features in your training materials.

Contributing through GitHub

How to collaborate with the GTN

Analyses using GTN data

Over the years publications about the GTN and GTN communities have been published, and used GTN (meta)data to do it. These tutorials will show you how to leverage some of the data already contained within the GTN, but beware, they generally require programming skills!

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Bérénice Batut

Björn Grüning

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Niall Beard

Christine Hadrossek

Armin Dadras

Simon Bray

Pablo Moreno

Dominique Green

Anthony Bretaudeau

Saskia Hiltemann

Gildas Le Corguillé

Vojdan Kjorveziroski

Patricia Palagi

Mehmet Tekman

Achim Winandi

Fotis E. Psomopoulos

Linelle Abueg

Anastas Mishev

Marius van den Beek

Melissa Burke

Bérénice Batut

William Durand

Lucille Delisle

Sonja Filiposka

Nicola Soranzo

Julia Jakiela

Cyril Monjeaud

Irakleitos Souyioultzoglou

Martin Čech

Cristóbal Gallardo

Marisa Loach

Allegra Via

Helena Rasche

Wendi Bacon

Bert Droesbeke

Krzysztof Poterlowicz

Bazante Sanders

Björn Grüning

Simon Gladman

Andrea Bagnacani

Katarzyna Kamieniecka

Donny Vrins

Carolin Leister

Marie Josse

Nils Mittler

Pavankumar Videm

Peter van Heusden

Аrnaud Gingold

Teresa Müller

Phil Reed

Funding

These individuals or organisations provided funding support for the development of this resource

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

de.KCD

DASH UK

This Fellowship was funded through the ELIXIR-UK DaSH project as part of the UKRI Innovation Scholars: Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1). The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources.

UFR

ELIXIR Europe

de.NBI

Skills4SEOSC