:
toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/1.0.1+galaxy3
Metadata
Links
Observed Tool Versions
Within GTN tutorials
1.0.1+galaxy3
0.24.1+galaxy0
0.24.0+galaxy4
0.23.4+galaxy1
0.23.4+galaxy0
0.23.2+galaxy0
0.20.1+galaxy0
Relevant Tutorials
- Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
- Assembly / Large genome assembly and polishing
- Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
- Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
- Ecology / Taxonomic Analysis of eDNA
- Using Galaxy and Managing your Data / Automating Galaxy workflows using the command line
- Introduction to Galaxy Analyses / NGS data logistics
- Introduction to Galaxy Analyses / Very Short Introductions: QC
- Microbiome / Identification of the micro-organisms in a beer using Nanopore sequencing
- Microbiome / MGnify v5.0 Amplicon Pipeline
- Microbiome / 16S Microbial analysis with Nanopore data
- Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
- Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data
- Transcriptomics / Genome-wide alternative splicing analysis
- Variant Analysis / Avian influenza viral strain analysis from gene segment sequencing data
- Variant Analysis / Pox virus genome analysis from tiled-amplicon sequencing data
- Variant Analysis / From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
- Variant Analysis / M. tuberculosis Variant Analysis